HL_8P2K_127
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- (PSU)UUAAUUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 8P2K|1|B5|A|3374, 8P2K|1|B5|A|3375, 8P2K|1|B5|U|3376, 8P2K|1|B5|A|3380
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P2K_127 not in the Motif Atlas
- Homologous match to HL_8C3A_046
- Geometric discrepancy: 0.2046
- The information below is about HL_8C3A_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43613.6
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
8P2K|1|B5|PSU|3371
8P2K|1|B5|U|3372
8P2K|1|B5|U|3373
8P2K|1|B5|A|3374
8P2K|1|B5|A|3375
8P2K|1|B5|U|3376
8P2K|1|B5|U|3377
8P2K|1|B5|A|3378
8P2K|1|B5|A|3379
8P2K|1|B5|A|3380
8P2K|1|B5|A|3381
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BA
- 60S ribosomal protein L8
- Chain BK
- Glucose-6-phosphate isomerase
- Chain Bj
- Ribosomal protein L37
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