HL_8P4V_078
3D structure
- PDB id
- 8P4V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with HaterumaimideQ
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.16 Å
Loop
- Sequence
- GUAAUUC
- Length
- 7 nucleotides
- Bulged bases
- 8P4V|1|A|U|158, 8P4V|1|A|U|159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P4V_078 not in the Motif Atlas
- Homologous match to HL_8P9A_192
- Geometric discrepancy: 0.1308
- The information below is about HL_8P9A_192
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_37824.7
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 349
Unit IDs
8P4V|1|A|G|154
8P4V|1|A|U|155
8P4V|1|A|A|156
8P4V|1|A|A|157
8P4V|1|A|U|158
8P4V|1|A|U|159
8P4V|1|A|C|160
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain H
- 40S ribosomal protein S6-A
- Chain Z
- 40S ribosomal protein S24-A
Coloring options: