HL_8P9A_045
3D structure
- PDB id
- 8P9A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Methyllissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UCUAAUUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 8P9A|1|1|A|2138, 8P9A|1|1|A|2139, 8P9A|1|1|U|2140, 8P9A|1|1|A|2144
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P9A_045 not in the Motif Atlas
- Homologous match to HL_8P9A_157
- Geometric discrepancy: 0.0488
- The information below is about HL_8P9A_157
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8P9A|1|1|U|2135
8P9A|1|1|C|2136
8P9A|1|1|U|2137
8P9A|1|1|A|2138
8P9A|1|1|A|2139
8P9A|1|1|U|2140
8P9A|1|1|U|2141
8P9A|1|1|A|2142
8P9A|1|1|A|2143
8P9A|1|1|A|2144
8P9A|1|1|A|2145
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AK
- 60S ribosomal protein L37-A
- Chain j
- 60S ribosomal protein L2-A
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