HL_8PKL_060
3D structure
- PDB id
- 8PKL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.09 Å
Loop
- Sequence
- AGUUCAUAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PKL_060 not in the Motif Atlas
- Homologous match to HL_4WF9_056
- Geometric discrepancy: 0.188
- The information below is about HL_4WF9_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.1
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8PKL|1|7|A|2471
8PKL|1|7|G|2472
8PKL|1|7|U|2473
8PKL|1|7|U|2474
8PKL|1|7|C|2475
8PKL|1|7|A|2476
8PKL|1|7|U|2477
8PKL|1|7|A|2478
8PKL|1|7|U|2479
Current chains
- Chain 7
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L36
- Chain Y
- Transfer RNA; tRNA
- Chain f
- 50S ribosomal protein L6
- Chain h
- 50S ribosomal protein L16
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