HL_8PNN_082
3D structure
- PDB id
- 8PNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Bromolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUAGUGGC
- Length
- 9 nucleotides
- Bulged bases
- 8PNN|1|A|G|337
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8PNN_082 not in the Motif Atlas
- Homologous match to HL_8CRE_198
- Geometric discrepancy: 0.0659
- The information below is about HL_8CRE_198
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84299.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8PNN|1|A|G|330
8PNN|1|A|A|331
8PNN|1|A|U|332
8PNN|1|A|A|333
8PNN|1|A|G|334
8PNN|1|A|U|335
8PNN|1|A|G|336
8PNN|1|A|G|337
8PNN|1|A|C|338
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain J
- 40S ribosomal protein S8-A
- Chain M
- 40S ribosomal protein S11-A
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