HL_8Q5I_015
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- GUGUAAAAC
- Length
- 9 nucleotides
- Bulged bases
- 8Q5I|1|1|U|687, 8Q5I|1|1|A|689
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Q5I_015 not in the Motif Atlas
- Homologous match to HL_8C3A_015
- Geometric discrepancy: 0.052
- The information below is about HL_8C3A_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53971.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8Q5I|1|1|G|684
8Q5I|1|1|U|685
8Q5I|1|1|G|686
8Q5I|1|1|U|687
8Q5I|1|1|A|688
8Q5I|1|1|A|689
8Q5I|1|1|A|690
8Q5I|1|1|A|691
8Q5I|1|1|C|692
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain 9
- Ribosomal protein L24
- Chain l
- 60S ribosomal protein L4-B
- Chain t
- 60S ribosomal protein L13
- Chain v
- 60S ribosomal protein L15-A
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