HL_8Q5I_046
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- AGUAACUAUGACU
- Length
- 13 nucleotides
- Bulged bases
- 8Q5I|1|1|A|2234
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Q5I_046 not in the Motif Atlas
- Homologous match to HL_8P9A_160
- Geometric discrepancy: 0.5675
- The information below is about HL_8P9A_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_70658.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
8Q5I|1|1|A|2230
8Q5I|1|1|G|2231
8Q5I|1|1|U|2232
8Q5I|1|1|A|2233
8Q5I|1|1|A|2234
8Q5I|1|1|C|2235
8Q5I|1|1|U|2236
8Q5I|1|1|A|2237
8Q5I|1|1|U|2238
8Q5I|1|1|G|2239
8Q5I|1|1|A|2240
8Q5I|1|1|C|2241
8Q5I|1|1|U|2242
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: