HL_8Q5I_083
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 8Q5I|1|A|C|400, 8Q5I|1|A|G|401
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Q5I_083 not in the Motif Atlas
- Homologous match to HL_8C3A_201
- Geometric discrepancy: 0.0579
- The information below is about HL_8C3A_201
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8Q5I|1|A|C|391
8Q5I|1|A|C|392
8Q5I|1|A|U|393
8Q5I|1|A|G|394
8Q5I|1|A|A|395
8Q5I|1|A|G|396
8Q5I|1|A|A|397
8Q5I|1|A|A|398
8Q5I|1|A|A|399
8Q5I|1|A|C|400
8Q5I|1|A|G|401
8Q5I|1|A|G|402
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain F
- 40S ribosomal protein S4
- Chain H
- 40S ribosomal protein S6
- Chain J
- 40S ribosomal protein S8
- Chain Z
- 40S ribosomal protein S24
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