HL_8QCQ_086
3D structure
- PDB id
- 8QCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- B. subtilis ApdA-stalled ribosomal complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QCQ_086 not in the Motif Atlas
- Homologous match to HL_4LFB_015
- Geometric discrepancy: 0.0751
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
8QCQ|1|a|C|698
8QCQ|1|a|G|699
8QCQ|1|a|G|700
8QCQ|1|a|U|701
8QCQ|1|a|G|702
8QCQ|1|a|A|703
8QCQ|1|a|A|704
8QCQ|1|a|A|705
8QCQ|1|a|U|706
8QCQ|1|a|G|707
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain g
- Small ribosomal subunit protein uS7
- Chain k
- 30S ribosomal protein S11
Coloring options: