HL_8QCQ_092
3D structure
- PDB id
- 8QCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- B. subtilis ApdA-stalled ribosomal complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- GAAGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 8QCQ|1|a|G|981
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QCQ_092 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.1134
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8QCQ|1|a|G|973
8QCQ|1|a|A|974
8QCQ|1|a|A|975
8QCQ|1|a|G|976
8QCQ|1|a|C|977
8QCQ|1|a|A|978
8QCQ|1|a|A|979
8QCQ|1|a|C|980
8QCQ|1|a|G|981
8QCQ|1|a|C|982
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain w
- Transfer RNA; tRNA
- Chain y
- Transfer RNA; tRNA
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