HL_8QCQ_094

3D structure

PDB id

8QCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

B. subtilis ApdA-stalled ribosomal complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

CCUUCGG

Length

7 nucleotides

Bulged bases

8QCQ|1|a|U|1040

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QCQ_094 not in the Motif Atlas

Geometric match to HL_8C3A_012

Geometric discrepancy: 0.2063

The information below is about HL_8C3A_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

8QCQ|1|a|C|1037
8QCQ|1|a|C|1038
8QCQ|1|a|U|1039
8QCQ|1|a|U|1040
8QCQ|1|a|C|1041
8QCQ|1|a|G|1042
8QCQ|1|a|G|1043

Current chains

Chain a

16S rRNA

Nearby chains