HL_8QPP_015
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QPP_015 not in the Motif Atlas
- Homologous match to HL_4LFB_015
- Geometric discrepancy: 0.1804
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
8QPP|1|A|C|698
8QPP|1|A|G|699
8QPP|1|A|G|700
8QPP|1|A|U|701
8QPP|1|A|G|702
8QPP|1|A|A|703
8QPP|1|A|A|704
8QPP|1|A|A|705
8QPP|1|A|U|706
8QPP|1|A|G|707
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain G
- 30S ribosomal protein S7
- Chain K
- 30S ribosomal protein S11
- Chain V
- mRNA (33-MER)
- Chain X
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: