HL_8QU5_015
3D structure
- PDB id
- 8QU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mt-LSU assembly intermediate in GTPBP8 knock-out cells, state 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- AAACAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QU5_015 not in the Motif Atlas
- Geometric match to HL_5TBW_075
- Geometric discrepancy: 0.2656
- The information below is about HL_5TBW_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_22523.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
8QU5|1|A|A|2319
8QU5|1|A|A|2320
8QU5|1|A|A|2321
8QU5|1|A|C|2322
8QU5|1|A|A|2323
8QU5|1|A|U|2324
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 0
- 39S ribosomal protein L32, mitochondrial
- Chain O
- 39S ribosomal protein L17, mitochondrial
- Chain s
- 39S ribosomal protein S30, mitochondrial
Coloring options: