HL_8QYX_010
3D structure
- PDB id
- 8QYX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.78 Å
Loop
- Sequence
- CGUAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QYX_010 not in the Motif Atlas
- Homologous match to HL_8P9A_122
- Geometric discrepancy: 0.0733
- The information below is about HL_8P9A_122
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 335
Unit IDs
8QYX|1|A2|C|368
8QYX|1|A2|G|369
8QYX|1|A2|U|370
8QYX|1|A2|A|371
8QYX|1|A2|A|372
8QYX|1|A2|G|373
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain F2
- 60S ribosomal protein L4
- Chain d1
- 60S ribosomal protein L37
- Chain f1
- 60S ribosomal protein L39
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