HL_8QYX_047
3D structure
- PDB id
- 8QYX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.78 Å
Loop
- Sequence
- (PSU)UUAAUUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 8QYX|1|A2|A|3642, 8QYX|1|A2|A|3643, 8QYX|1|A2|U|3644, 8QYX|1|A2|A|3648
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8QYX_047 not in the Motif Atlas
- Homologous match to HL_8P9A_157
- Geometric discrepancy: 0.1182
- The information below is about HL_8P9A_157
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8QYX|1|A2|PSU|3639
8QYX|1|A2|U|3640
8QYX|1|A2|U|3641
8QYX|1|A2|A|3642
8QYX|1|A2|A|3643
8QYX|1|A2|U|3644
8QYX|1|A2|U|3645
8QYX|1|A2|A|3646
8QYX|1|A2|A|3647
8QYX|1|A2|A|3648
8QYX|1|A2|A|3649
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain D2
- Large ribosomal subunit protein uL2
- Chain d1
- 60S ribosomal protein L37
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