HL_8QYX_071
3D structure
- PDB id
- 8QYX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.78 Å
Loop
- Sequence
- AUCUCGUCUGAUCU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01182.1
- Basepair signature
- cWW-cWS-F-tSW-F-tSH-tSH-cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
8QYX|1|B2|A|32
8QYX|1|B2|U|33
8QYX|1|B2|C|34
8QYX|1|B2|U|35
8QYX|1|B2|C|36
8QYX|1|B2|G|37
8QYX|1|B2|U|38
8QYX|1|B2|C|39
8QYX|1|B2|U|40
8QYX|1|B2|G|41
8QYX|1|B2|A|42
8QYX|1|B2|U|43
8QYX|1|B2|C|44
8QYX|1|B2|U|45
Current chains
- Chain B2
- 5S rRNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain E1
- 60S ribosomal protein L11
- Chain G2
- 60S ribosomal protein L5
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