HL_8R3V_016

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

8R3V|1|72|C|490

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R3V_016 not in the Motif Atlas

Homologous match to HL_5J7L_148

Geometric discrepancy: 0.0855

The information below is about HL_5J7L_148

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

8R3V|1|72|C|487
8R3V|1|72|G|488
8R3V|1|72|G|489
8R3V|1|72|C|490
8R3V|1|72|G|491
8R3V|1|72|A|492
8R3V|1|72|G|493

Current chains

Chain 72

23S ribosomal RNA

Nearby chains