HL_8R3V_029

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

8R3V|1|72|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R3V_029 not in the Motif Atlas

Homologous match to HL_6PRV_001

Geometric discrepancy: 0.1888

The information below is about HL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20174.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

8R3V|1|72|C|1064
8R3V|1|72|U|1065
8R3V|1|72|U|1066
8R3V|1|72|A|1067
8R3V|1|72|G|1068
8R3V|1|72|A|1069
8R3V|1|72|A|1070
8R3V|1|72|G|1071
8R3V|1|72|C|1072
8R3V|1|72|A|1073
8R3V|1|72|G|1074

Current chains

Chain 72

23S ribosomal RNA

Nearby chains