HL_8R3V_050

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

8R3V|1|72|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R3V_050 not in the Motif Atlas

Homologous match to HL_5J7L_182

Geometric discrepancy: 0.0717

The information below is about HL_5J7L_182

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

8R3V|1|72|G|1949
8R3V|1|72|G|1950
8R3V|1|72|U|1951
8R3V|1|72|A|1952
8R3V|1|72|A|1953
8R3V|1|72|G|1954
8R3V|1|72|U|1955
8R3V|1|72|U|1956
8R3V|1|72|C|1957

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain A2

Small subunit ribosomal RNA; SSU rRNA

Chain Y2

Transfer RNA; tRNA