HL_8R3V_055

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

8R3V|1|72|A|2268, 8R3V|1|72|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R3V_055 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0568

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

8R3V|1|72|C|2264
8R3V|1|72|U|2265
8R3V|1|72|A|2266
8R3V|1|72|A|2267
8R3V|1|72|A|2268
8R3V|1|72|G|2269
8R3V|1|72|A|2270
8R3V|1|72|G|2271
8R3V|1|72|U|2272
8R3V|1|72|A|2273
8R3V|1|72|A|2274
8R3V|1|72|C|2275
8R3V|1|72|G|2276

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain h2

50S ribosomal protein L16

Chain z2

50S ribosomal protein L27