HL_8R3V_060

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

8R3V|1|72|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R3V_060 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.0721

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

8R3V|1|72|U|2404
8R3V|1|72|G|2405
8R3V|1|72|A|2406
8R3V|1|72|A|2407
8R3V|1|72|U|2408
8R3V|1|72|G|2409
8R3V|1|72|G|2410
8R3V|1|72|A|2411
8R3V|1|72|A|2412
8R3V|1|72|G|2413

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain o2

50S ribosomal protein L15