HL_8R3V_130

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

8R3V|1|A2|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R3V_130 not in the Motif Atlas

Homologous match to HL_4LFB_026

Geometric discrepancy: 0.3092

The information below is about HL_4LFB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92935.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

5

Unit IDs

8R3V|1|A2|G|1134
8R3V|1|A2|U|1135
8R3V|1|A2|C|1136
8R3V|1|A2|C|1137
8R3V|1|A2|G|1138
8R3V|1|A2|G|1139
8R3V|1|A2|C|1140

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain I2

Small ribosomal subunit protein uS9