HL_8R3V_150

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

(PSU)GCUAACG

Length

8 nucleotides

Bulged bases

8R3V|1|72|U|958, 8R3V|1|72|C|961

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R3V_150 not in the Motif Atlas

Homologous match to HL_5J7L_211

Geometric discrepancy: 0.1379

The information below is about HL_5J7L_211

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

8R3V|1|72|PSU|955
8R3V|1|72|G|956
8R3V|1|72|C|957
8R3V|1|72|U|958
8R3V|1|72|A|959
8R3V|1|72|A|960
8R3V|1|72|C|961
8R3V|1|72|G|962

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain 82

5S ribosomal RNA; 5S rRNA

Chain h2

50S ribosomal protein L16