HL_8R55_002
3D structure
- PDB id
- 8R55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.57 Å
Loop
- Sequence
- AUUGAAAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8R55_002 not in the Motif Atlas
- Homologous match to HL_7U2I_104
- Geometric discrepancy: 0.2202
- The information below is about HL_7U2I_104
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
8R55|1|7|A|31
8R55|1|7|U|32
8R55|1|7|U|33
8R55|1|7|G|34
8R55|1|7|A|35
8R55|1|7|A|36
8R55|1|7|A|37
8R55|1|7|A|38
8R55|1|7|U|39
Current chains
- Chain 7
- tRNA (73-MER)
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain L
- 30S ribosomal protein S12
- Chain V
- mRNA (33-MER)
- Chain X
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: