HL_8R55_042

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CGUAAUGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_042 not in the Motif Atlas

Homologous match to HL_4WF9_004

Geometric discrepancy: 0.2696

The information below is about HL_4WF9_004

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.1

Basepair signature

cWW-F

Number of instances in this motif group

10

Unit IDs

8R55|1|X|C|136
8R55|1|X|G|137
8R55|1|X|U|138
8R55|1|X|A|139
8R55|1|X|A|140
8R55|1|X|U|141
8R55|1|X|G|142
8R55|1|X|G|143

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain s

Large ribosomal subunit protein uL23