HL_8R55_044

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

8R55|1|X|A|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_044 not in the Motif Atlas

Homologous match to HL_4WF9_006

Geometric discrepancy: 0.115

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

8R55|1|X|G|197
8R55|1|X|A|198
8R55|1|X|A|199
8R55|1|X|A|200
8R55|1|X|C|201
8R55|1|X|A|202
8R55|1|X|U|203
8R55|1|X|C|204

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain i

50S ribosomal protein L15

Chain v

Large ribosomal subunit protein bL28