HL_8R55_052

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

8R55|1|X|G|458

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_052 not in the Motif Atlas

Homologous match to HL_7A0S_014

Geometric discrepancy: 0.1202

The information below is about HL_7A0S_014

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

8R55|1|X|G|457
8R55|1|X|G|458
8R55|1|X|A|459
8R55|1|X|C|460
8R55|1|X|C|461
8R55|1|X|A|462
8R55|1|X|U|463
8R55|1|X|C|464

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains