HL_8R55_062

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

UGAAAUG

Length

7 nucleotides

Bulged bases

8R55|1|X|A|828, 8R55|1|X|U|831

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_062 not in the Motif Atlas

Homologous match to HL_7A0S_023

Geometric discrepancy: 0.1146

The information below is about HL_7A0S_023

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_51020.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

11

Unit IDs

8R55|1|X|U|826
8R55|1|X|G|827
8R55|1|X|A|828
8R55|1|X|A|829
8R55|1|X|A|830
8R55|1|X|U|831
8R55|1|X|G|832

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain Z

Large ribosomal subunit protein uL2