HL_8R55_074

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

8R55|1|X|U|1435, 8R55|1|X|U|1436

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_074 not in the Motif Atlas

Homologous match to HL_4WF9_035

Geometric discrepancy: 0.1946

The information below is about HL_4WF9_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77449.1

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

14

Unit IDs

8R55|1|X|G|1428
8R55|1|X|U|1429
8R55|1|X|U|1430
8R55|1|X|G|1431
8R55|1|X|A|1432
8R55|1|X|U|1433
8R55|1|X|A|1434
8R55|1|X|U|1435
8R55|1|X|U|1436
8R55|1|X|C|1437

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain s

Large ribosomal subunit protein uL23