HL_8R55_088

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

8R55|1|X|U|1984

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_088 not in the Motif Atlas

Homologous match to HL_4WF9_046

Geometric discrepancy: 0.1331

The information below is about HL_4WF9_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61418.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

8

Unit IDs

8R55|1|X|G|1978
8R55|1|X|G|1979
8R55|1|X|U|1980
8R55|1|X|A|1981
8R55|1|X|A|1982
8R55|1|X|G|1983
8R55|1|X|U|1984
8R55|1|X|U|1985
8R55|1|X|C|1986

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain f

50S ribosomal protein L14