HL_8R55_093

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

8R55|1|X|A|2297, 8R55|1|X|C|2304

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_093 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.1129

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

8R55|1|X|C|2293
8R55|1|X|U|2294
8R55|1|X|A|2295
8R55|1|X|A|2296
8R55|1|X|A|2297
8R55|1|X|A|2298
8R55|1|X|G|2299
8R55|1|X|G|2300
8R55|1|X|U|2301
8R55|1|X|A|2302
8R55|1|X|A|2303
8R55|1|X|C|2304
8R55|1|X|G|2305

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain j

Large ribosomal subunit protein uL16

Chain u

Large ribosomal subunit protein bL27