HL_8R55_099
3D structure
- PDB id
- 8R55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.57 Å
Loop
- Sequence
- AGUCCACAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8R55_099 not in the Motif Atlas
- Homologous match to HL_7A0S_059
- Geometric discrepancy: 0.2919
- The information below is about HL_7A0S_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.1
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8R55|1|X|A|2500
8R55|1|X|G|2501
8R55|1|X|U|2502
8R55|1|X|C|2503
8R55|1|X|C|2504
8R55|1|X|A|2505
8R55|1|X|C|2506
8R55|1|X|A|2507
8R55|1|X|U|2508
Current chains
- Chain X
- 23S RNA (2887-MER)
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain 7
- Transfer RNA; tRNA
- Chain d
- Large ribosomal subunit protein uL6
- Chain j
- Large ribosomal subunit protein uL16
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