HL_8RCL_023

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

U(1MG)(PSU)(5MU)GAAAAA

Length

10 nucleotides

Bulged bases

8RCL|1|72|A|751, 8RCL|1|72|A|752

QA status

Modified nucleotides: 1MG, PSU, 5MU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCL_023 not in the Motif Atlas

Homologous match to HL_5J7L_155

Geometric discrepancy: 0.1556

The information below is about HL_5J7L_155

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_88205.2

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

7

Unit IDs

8RCL|1|72|U|744
8RCL|1|72|1MG|745
8RCL|1|72|PSU|746
8RCL|1|72|5MU|747
8RCL|1|72|G|748
8RCL|1|72|A|749
8RCL|1|72|A|750
8RCL|1|72|A|751
8RCL|1|72|A|752
8RCL|1|72|A|753

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain l2

50S ribosomal protein L34

Chain p

Nascent chain