HL_8RCM_023

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

U(1MG)(PSU)(5MU)GAAAAA

Length

10 nucleotides

Bulged bases

8RCM|1|72|A|751, 8RCM|1|72|A|752

QA status

Modified nucleotides: 1MG, PSU, 5MU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCM_023 not in the Motif Atlas

Homologous match to HL_5J7L_155

Geometric discrepancy: 0.0791

The information below is about HL_5J7L_155

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_88205.2

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

7

Unit IDs

8RCM|1|72|U|744
8RCM|1|72|1MG|745
8RCM|1|72|PSU|746
8RCM|1|72|5MU|747
8RCM|1|72|G|748
8RCM|1|72|A|749
8RCM|1|72|A|750
8RCM|1|72|A|751
8RCM|1|72|A|752
8RCM|1|72|A|753

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain l2

50S ribosomal protein L34

Chain p

Nascent chain