HL_8RCT_006

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

UGAAUCCAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RCT_006 not in the Motif Atlas

Homologous match to HL_5J7L_138

Geometric discrepancy: 0.114

The information below is about HL_5J7L_138

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_68257.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

8RCT|1|72|U|158
8RCT|1|72|G|159
8RCT|1|72|A|160
8RCT|1|72|A|161
8RCT|1|72|U|162
8RCT|1|72|C|163
8RCT|1|72|C|164
8RCT|1|72|A|165
8RCT|1|72|U|166
8RCT|1|72|A|167
8RCT|1|72|G|168

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain 12

50S ribosomal protein L28