HL_8RDW_090

3D structure

PDB id

8RDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon and EF-Tu(GDP) (structure 3).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.74 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

8RDW|1|iN|C|1075

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RDW_090 not in the Motif Atlas

Geometric match to HL_4KJI_001

Geometric discrepancy: 0.338

The information below is about HL_4KJI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_97696.1

Basepair signature

cWW-F-F

Number of instances in this motif group

6

Unit IDs

8RDW|1|iN|C|1072
8RDW|1|iN|U|1073
8RDW|1|iN|U|1074
8RDW|1|iN|C|1075
8RDW|1|iN|G|1076
8RDW|1|iN|G|1077

Current chains

Chain iN

16S rRNA

Nearby chains