HL_8RXH_001
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- UAAGCAUA
- Length
- 8 nucleotides
- Bulged bases
- 8RXH|1|L1|A|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RXH_001 not in the Motif Atlas
- Homologous match to HL_8P9A_113
- Geometric discrepancy: 0.0778
- The information below is about HL_8P9A_113
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_48677.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
8RXH|1|L1|U|36
8RXH|1|L1|A|37
8RXH|1|L1|A|38
8RXH|1|L1|G|39
8RXH|1|L1|C|40
8RXH|1|L1|A|41
8RXH|1|L1|U|42
8RXH|1|L1|A|43
Current chains
- Chain L1
- LSUa_rRNA_chain_1
Nearby chains
- Chain L2
- Large subunit ribosomal RNA; LSU rRNA
- Chain LI
- Putative 60S ribosomal protein L13
- Chain LL
- Putative 60S ribosomal protein L27A/L29
- Chain LM
- Ribosomal protein L15
- Chain Lp
- Putative 60S ribosomal protein L44
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