HL_8RXH_014

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

CGCG

Length

4 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RXH_014 not in the Motif Atlas

Geometric match to HL_3SKI_003

Geometric discrepancy: 0.2471

The information below is about HL_3SKI_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_97696.1

Basepair signature

cWW-F-F

Number of instances in this motif group

6

Unit IDs

8RXH|1|L1|C|600
8RXH|1|L1|G|601
8RXH|1|L1|C|604
8RXH|1|L1|G|605

Current chains

Chain L1

LSUa_rRNA_chain_1

Nearby chains

Chain LS

Putative 60S ribosomal protein L21

Chain Lc

Putative 60S ribosomal protein L7