HL_8RXH_028
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- GAAUGAAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RXH_028 not in the Motif Atlas
- Homologous match to HL_5TBW_026
- Geometric discrepancy: 0.1632
- The information below is about HL_5TBW_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_44398.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8RXH|1|L1|G|1205
8RXH|1|L1|A|1206
8RXH|1|L1|A|1207
8RXH|1|L1|U|1208
8RXH|1|L1|G|1209
8RXH|1|L1|A|1210
8RXH|1|L1|A|1211
8RXH|1|L1|C|1212
Current chains
- Chain L1
- LSUa_rRNA_chain_1
Nearby chains
- Chain L2
- Large subunit ribosomal RNA; LSU rRNA
- Chain L8
- 5S ribosomal RNA; 5S rRNA
- Chain Lc
- Putative 60S ribosomal protein L7
- Chain Lf
- 60S ribosomal protein L32
- Chain Lg
- Putative ribosomal protein l35a
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