HL_8RXH_039
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- GUUCGC
- Length
- 6 nucleotides
- Bulged bases
- 8RXH|1|L2|U|109
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RXH_039 not in the Motif Atlas
- Homologous match to HL_8C3A_043
- Geometric discrepancy: 0.063
- The information below is about HL_8C3A_043
- Detailed Annotation
- UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_34617.1
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 57
Unit IDs
8RXH|1|L2|G|107
8RXH|1|L2|U|108
8RXH|1|L2|U|109
8RXH|1|L2|C|110
8RXH|1|L2|G|111
8RXH|1|L2|C|112
Current chains
- Chain L2
- LSUb_rRNA_chain_2
Nearby chains
- Chain L1
- Large subunit ribosomal RNA; LSU rRNA
- Chain Ln
- 60S ribosomal protein L41
- Chain Lo
- 60S ribosomal protein L37a
- Chain S1
- Small subunit ribosomal RNA; SSU rRNA
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