HL_8RXH_065
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- UGGUAA(OMU)G
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RXH_065 not in the Motif Atlas
- Geometric match to HL_3RG5_006
- Geometric discrepancy: 0.3722
- The information below is about HL_3RG5_006
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- tRNA anticodon loop
- Motif group
- HL_87268.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
8RXH|1|L3|U|7
8RXH|1|L3|G|8
8RXH|1|L3|G|9
8RXH|1|L3|U|10
8RXH|1|L3|A|11
8RXH|1|L3|A|12
8RXH|1|L3|OMU|13
8RXH|1|L3|G|14
Current chains
- Chain L3
- SR1_chain_3
Nearby chains
- Chain LY
- 60S ribosomal protein L27
- Chain Lh
- Putative 60S ribosomal protein L34
Coloring options: