HL_8RXH_067
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- GCGUUGUUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RXH_067 not in the Motif Atlas
- Geometric match to HL_6UFM_001
- Geometric discrepancy: 0.3267
- The information below is about HL_6UFM_001
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_04642.3
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8RXH|1|L3|G|118
8RXH|1|L3|C|119
8RXH|1|L3|G|120
8RXH|1|L3|U|121
8RXH|1|L3|U|122
8RXH|1|L3|G|123
8RXH|1|L3|U|124
8RXH|1|L3|U|125
8RXH|1|L3|C|126
Current chains
- Chain L3
- SR1_chain_3
Nearby chains
- Chain L1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LQ
- Putative 60S ribosomal protein L19
- Chain Ld
- 60S ribosomal protein L30
- Chain Lo
- 60S ribosomal protein L37a
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