HL_8RXH_089
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- UGUAGUGGA
- Length
- 9 nucleotides
- Bulged bases
- 8RXH|1|S1|G|381
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RXH_089 not in the Motif Atlas
- Homologous match to HL_8C3A_199
- Geometric discrepancy: 0.1109
- The information below is about HL_8C3A_199
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8RXH|1|S1|U|374
8RXH|1|S1|G|375
8RXH|1|S1|U|376
8RXH|1|S1|A|377
8RXH|1|S1|G|378
8RXH|1|S1|U|379
8RXH|1|S1|G|380
8RXH|1|S1|G|381
8RXH|1|S1|A|382
Current chains
- Chain S1
- SSU_rRNA_chain_S1
Nearby chains
- Chain SK
- 40S ribosomal protein S8
- Chain SU
- Ribosomal protein S17 family protein
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