HL_8RXH_132
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- (PSU)CCAGUA(OMC)G
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RXH_132 not in the Motif Atlas
- Homologous match to HL_8C3A_059
- Geometric discrepancy: 0.3187
- The information below is about HL_8C3A_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34636.1
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8RXH|1|L2|PSU|1152
8RXH|1|L2|C|1153
8RXH|1|L2|C|1154
8RXH|1|L2|A|1155
8RXH|1|L2|G|1156
8RXH|1|L2|U|1157
8RXH|1|L2|A|1158
8RXH|1|L2|OMC|1159
8RXH|1|L2|G|1160
Current chains
- Chain L2
- LSUb_rRNA_chain_2
Nearby chains
- Chain L1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LL
- Putative 60S ribosomal protein L27A/L29
- Chain LP
- 60S ribosomal protein L18
- Chain LS
- Putative 60S ribosomal protein L21
- Chain Lp
- Putative 60S ribosomal protein L44
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