HL_8SCB_090

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CUUCGCGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8SCB_090 not in the Motif Atlas

Geometric match to HL_4V88_215

Geometric discrepancy: 0.387

The information below is about HL_4V88_215

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

8SCB|1|9|C|196
8SCB|1|9|U|197
8SCB|1|9|U|198
8SCB|1|9|C|199
8SCB|1|9|G|200
8SCB|1|9|C|201
8SCB|1|9|G|202
8SCB|1|9|G|203

Current chains

Chain 9

18S_rRNA

Nearby chains

Chain II

eS8