HL_8T5H_026
3D structure
- PDB id
- 8T5H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGUAACAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8T5H_026 not in the Motif Atlas
- Homologous match to HL_8VTW_021
- Geometric discrepancy: 0.2754
- The information below is about HL_8VTW_021
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_27115.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
8T5H|1|B|G|712
8T5H|1|B|G|713
8T5H|1|B|U|714
8T5H|1|B|A|715
8T5H|1|B|A|716
8T5H|1|B|C|717
8T5H|1|B|A|718
8T5H|1|B|C|719
Current chains
- Chain B
- 23S
Nearby chains
- Chain n
- 30S ribosomal protein S15
- Chain v
- Small subunit ribosomal RNA; SSU rRNA
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