HL_8URI_031
3D structure
- PDB id
- 8URI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 27 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- GUUAAGUC
- Length
- 8 nucleotides
- Bulged bases
- 8URI|1|D|G|1094
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8URI_031 not in the Motif Atlas
- Homologous match to HL_4LFB_025
- Geometric discrepancy: 0.0863
- The information below is about HL_4LFB_025
- Detailed Annotation
- T-loop related
- Broad Annotation
- T-loop
- Motif group
- HL_77436.5
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
8URI|1|D|G|1089
8URI|1|D|U|1090
8URI|1|D|U|1091
8URI|1|D|A|1092
8URI|1|D|A|1093
8URI|1|D|G|1094
8URI|1|D|U|1095
8URI|1|D|C|1096
Current chains
- Chain D
- 16S rRNA
Nearby chains
- Chain F
- 30S ribosomal protein S21
- Chain G
- 30S ribosomal protein S2
- Chain M
- 30S ribosomal protein S7
Coloring options: