HL_8URM_104
3D structure
- PDB id
- 8URM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUCAUGGGGUGUC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8URM_104 not in the Motif Atlas
- Geometric match to HL_8P9A_203
- Geometric discrepancy: 0.304
- The information below is about HL_8P9A_203
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_05304.3
- Basepair signature
- cWW-cWW-F-F-tSH-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8URM|1|5|G|29
8URM|1|5|U|30
8URM|1|5|C|31
8URM|1|5|A|32
8URM|1|5|U|33
8URM|1|5|G|34
8URM|1|5|G|35
8URM|1|5|G|36
8URM|1|5|G|37
8URM|1|5|U|38
8URM|1|5|G|39
8URM|1|5|U|40
8URM|1|5|C|41
Current chains
- Chain 5
- tRNA ProL
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- mRNA
- Chain n
- Small ribosomal subunit protein uS9
- Chain r
- 30S ribosomal protein S13
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