HL_8UT0_030

3D structure

PDB id

8UT0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.22 Å

Loop

Sequence

UUUCAAG

Length

7 nucleotides

Bulged bases

8UT0|1|2|C|1399

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UT0_030 not in the Motif Atlas

Homologous match to HL_8C3A_222

Geometric discrepancy: 0.4821

The information below is about HL_8C3A_222

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37369.1

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

8

Unit IDs

8UT0|1|2|U|1396
8UT0|1|2|U|1397
8UT0|1|2|U|1398
8UT0|1|2|C|1399
8UT0|1|2|A|1400
8UT0|1|2|A|1401
8UT0|1|2|G|1402

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SG

40S ribosomal protein S17-B