HL_8UT0_032
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- AUUGUAAUUAUU
- Length
- 12 nucleotides
- Bulged bases
- 8UT0|1|2|U|1557, 8UT0|1|2|U|1558, 8UT0|1|2|A|1559
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UT0_032 not in the Motif Atlas
- Homologous match to HL_8C3A_224
- Geometric discrepancy: 0.1503
- The information below is about HL_8C3A_224
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_03273.2
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8UT0|1|2|A|1550
8UT0|1|2|U|1551
8UT0|1|2|U|1552
8UT0|1|2|G|1553
8UT0|1|2|U|1554
8UT0|1|2|A|1555
8UT0|1|2|A|1556
8UT0|1|2|U|1557
8UT0|1|2|U|1558
8UT0|1|2|A|1559
8UT0|1|2|U|1560
8UT0|1|2|U|1561
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain SE
- 40S ribosomal protein S15
- Chain SH
- 40S ribosomal protein S18-A
- Chain SI
- 40S ribosomal protein S19-A
- Chain SM
- 40S ribosomal protein S29-A
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